2011-03-07 20:11:19 +00:00
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require 'formula'
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2011-03-10 05:11:03 +00:00
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class Tophat < Formula
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2011-06-23 14:45:38 +00:00
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url 'http://tophat.cbcb.umd.edu/downloads/tophat-1.3.1.tar.gz'
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2011-03-07 20:11:19 +00:00
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homepage 'http://tophat.cbcb.umd.edu/'
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2011-06-23 14:45:38 +00:00
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md5 'c6e39c7935fd6c7b43a80db3a179a537'
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2011-03-07 20:11:19 +00:00
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depends_on 'samtools'
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def install
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# It seems this project Makefile doesn't like -j4
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# Disable until consult with upstream
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ENV.deparallelize
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system "./configure", "--disable-debug", "--disable-dependency-tracking",
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"--prefix=#{prefix}"
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system "make install"
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end
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end
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