2018-02-10 18:44:28 +00:00
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class Fastme < Formula
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desc "Accurate and fast distance-based phylogeny inference program"
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homepage "http://www.atgc-montpellier.fr/fastme/"
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url "https://gite.lirmm.fr/atgc/FastME/raw/v2.1.6/tarball/fastme-2.1.6.tar.gz"
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sha256 "4945c151e15acffd64820c5e1a4c4ed57ab9fada7f3fe84e3423c5155546b1d0"
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2018-04-30 22:45:30 +00:00
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revision 1
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2018-02-10 18:44:28 +00:00
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2018-03-10 17:07:32 +00:00
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bottle do
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cellar :any
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2018-05-03 01:03:47 +00:00
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sha256 "411f3b6aaa0ee9e1946d93e06a4eb6aec7e4e2b2e7d87f0deb0288e333635203" => :high_sierra
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sha256 "5a722e15df45cfe77a39ab5c7f226422e589aa071eabf9c98bc0b779b4980620" => :sierra
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sha256 "d4640b1d176234cb35c25ca3d9ad5dc318db840a1c0a79fc057b08a738a6147c" => :el_capitan
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2018-03-10 17:07:32 +00:00
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end
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2018-02-10 18:44:28 +00:00
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depends_on "gcc"
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fails_with :clang # no OpenMP support
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def install
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system "./configure", "--disable-debug",
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"--disable-dependency-tracking",
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"--disable-silent-rules",
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"--prefix=#{prefix}"
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system "make", "install"
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end
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test do
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(testpath/"test.dist").write <<~EOS
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4
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A 0.0 1.0 2.0 4.0
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B 1.0 0.0 3.0 5.0
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C 2.0 3.0 0.0 6.0
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D 4.0 5.0 6.0 0.0
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EOS
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system "#{bin}/fastme", "-i", "test.dist"
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assert_predicate testpath/"test.dist_fastme_tree.nwk", :exist?
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end
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end
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