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igv: Does not require Java 8 (#44616)

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* igv: Does not require Java 8

Install igv.args.

* igv: Install igvtools
This commit is contained in:
Shaun Jackman 2019-10-02 19:36:49 -07:00 committed by chenrui
parent ce96946553
commit 1693a45dcc
1 changed files with 9 additions and 4 deletions
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13
Formula/igv.rb
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@ -3,18 +3,23 @@ class Igv < Formula
homepage "https://www.broadinstitute.org/software/igv"
url "https://data.broadinstitute.org/igv/projects/downloads/2.5/IGV_2.5.3.zip"
sha256 "d33f6e20aaf5158770c6154953b8b3df89ced0f9416b399502864d3ccd44f22a"
revision 1
bottle :unneeded
depends_on :java => "1.8"
depends_on :java
def install
inreplace "igv.sh", /^prefix=.*/, "prefix=#{libexec}"
libexec.install "igv.sh", "lib"
(bin/"igv").write_env_script libexec/"igv.sh", Language::Java.java_home_env("1.8")
inreplace ["igv.sh", "igvtools"], /^prefix=.*/, "prefix=#{libexec}"
inreplace "igvtools", "@igv.args", '@"${prefix}/igv.args"'
bin.install "igv.sh" => "igv"
bin.install "igvtools"
libexec.install "igv.args", "lib"
bin.env_script_all_files libexec, Language::Java.java_home_env
end
test do
assert_match "Usage:", shell_output("#{bin}/igvtools")
assert_match "org/broad/igv/ui/IGV.class", shell_output("jar tf #{libexec}/lib/igv.jar")
# Fails on Jenkins with Unhandled exception: java.awt.HeadlessException
unless ENV["CI"]