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vcftools 0.1.8a

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This commit is contained in:
Adam Vandenberg 2012-02-09 20:43:09 -08:00
parent 0f38481c01
commit 3c031a556e
2 changed files with 8 additions and 8 deletions
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14
Formula/vcftools.rb
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@ -1,16 +1,12 @@
require 'formula' require 'formula'
class Vcftools < Formula class Vcftools < Formula
url 'http://downloads.sourceforge.net/project/vcftools/vcftools_0.1.8.tar.gz'
homepage 'http://vcftools.sourceforge.net/index.html' homepage 'http://vcftools.sourceforge.net/index.html'
md5 '9895d3f30f2dac1eb01dd774557384de' url 'http://downloads.sourceforge.net/project/vcftools/vcftools_0.1.8a.tar.gz'
md5 'a4ec90c7583dd11bdc20a5f78a5a7857'
def install def install
system "make install PREFIX=#{prefix} CPP=#{ENV.cxx}" system "make", "install", "PREFIX=#{prefix}", "CPP=#{ENV.cxx}"
end
def test
system "vcftools"
end end
def caveats; <<-EOS.undent def caveats; <<-EOS.undent
@ -19,4 +15,8 @@ class Vcftools < Formula
export PERL5LIB=#{HOMEBREW_PREFIX}/lib/perl5/site_perl:${PERL5LIB} export PERL5LIB=#{HOMEBREW_PREFIX}/lib/perl5/site_perl:${PERL5LIB}
EOS EOS
end end
def test
system "#{bin}/vcftools"
end
end end

2
Formula/velvet.rb
View file

@ -13,6 +13,6 @@ class Velvet < Formula
s.change_make_var! "CFLAGS", "-Wall -m64" s.change_make_var! "CFLAGS", "-Wall -m64"
end end
system "make velveth velvetg OPENMP=1 MAXKMERLENGTH=1 LONGSEQUENCES=1" system "make velveth velvetg OPENMP=1 MAXKMERLENGTH=1 LONGSEQUENCES=1"
bin.install ['velveth', 'velvetg'] bin.install 'velveth', 'velvetg'
end end
end end