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samtools 1.1.17 and add install bcftools

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Signed-off-by: Adam Vandenberg <flangy@gmail.com>
This commit is contained in:
Carlos Borroto 2011-07-07 09:55:34 -04:00 committed by Adam Vandenberg
parent aaffc7e680
commit a25c265fc7
1 changed files with 6 additions and 4 deletions
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10
Formula/samtools.rb
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@ -1,19 +1,21 @@
require 'formula'
class Samtools < Formula
url 'http://sourceforge.net/projects/samtools/files/samtools/0.1.16/samtools-0.1.16.tar.bz2'
url 'http://sourceforge.net/projects/samtools/files/samtools/0.1.17/samtools-0.1.17.tar.bz2'
homepage 'http://samtools.sourceforge.net/'
md5 'ae26c63a783f95a45ddf8a109c9d9a5d'
md5 '9549f7a6bba894766df9c3dd18d61f0b'
head 'https://samtools.svn.sourceforge.net/svnroot/samtools/trunk/samtools'
def install
system "make"
system "make razip"
system "cd bcftools; make"
bin.install %w{samtools razip}
bin.install %w{samtools razip bcftools/bcftools}
(share+'samtools').install %w{examples misc}
(share+'samtools/misc').install %w{bcftools/vcfutils.pl}
lib.install 'libbam.a'
(include+'bam').install Dir['*.h']
man1.install 'samtools.1'
man1.install %w{samtools.1}
end
end