libbi 1.3.0 (new formula)
Closes #22777. Signed-off-by: FX Coudert <fxcoudert@gmail.com>
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FX Coudert
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133
Formula/libbi.rb
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133
Formula/libbi.rb
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class Libbi < Formula
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desc "Bayesian state-space modelling on parallel computer hardware"
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homepage "http://libbi.org"
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url "https://github.com/libbi/LibBi/archive/1.3.0.tar.gz"
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sha256 "0dd313dd71e72b2f16ca9074800fc2fa8bf585bec3b87a750ff27e467a9826d0"
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depends_on "automake" => :run
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depends_on "boost"
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depends_on "gsl"
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depends_on "netcdf"
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depends_on "qrupdate"
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resource "Test::Simple" do
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url "https://www.cpan.org/authors/id/E/EX/EXODIST/Test-Simple-1.302120.tar.gz"
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sha256 "c82360092d4dacd6e3248b613fa00053072fe9cf55d022f1e0f427f51d04346c"
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end
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resource "Getopt::ArgvFile" do
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url "https://www.cpan.org/CPAN/authors/id/J/JS/JSTENZEL/Getopt-ArgvFile-1.11.tar.gz"
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sha256 "3709aa513ce6fd71d1a55a02e34d2f090017d5350a9bd447005653c9b0835b22"
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end
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resource "Carp::Assert" do
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url "https://www.cpan.org/CPAN/authors/id/N/NE/NEILB/Carp-Assert-0.21.tar.gz"
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sha256 "924f8e2b4e3cb3d8b26246b5f9c07cdaa4b8800cef345fa0811d72930d73a54e"
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end
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resource "File::Slurp" do
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url "https://www.cpan.org/CPAN/authors/id/U/UR/URI/File-Slurp-9999.19.tar.gz"
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sha256 "ce29ebe995097ebd6e9bc03284714cdfa0c46dc94f6b14a56980747ea3253643"
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end
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resource "Parse::Yapp" do
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url "https://www.cpan.org/CPAN/authors/id/W/WB/WBRASWELL/Parse-Yapp-1.2.tar.gz"
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sha256 "4bd29f083c261253c6128303dc51bff88d6472c09c3846bd399e21f1f0c3e49a"
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end
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resource "Parse::Template" do
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url "https://www.cpan.org/CPAN/authors/id/P/PS/PSCUST/ParseTemplate-3.08.tar.gz"
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sha256 "3c7734f53999de8351a77cb09631d7a4a0482b6f54bca63d69d5a4eec8686d51"
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end
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resource "Parse::Lex" do
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url "https://www.cpan.org/CPAN/authors/id/P/PS/PSCUST/ParseLex-2.21.tar.gz"
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sha256 "f55f0a7d1e2a6b806a47840c81c16d505c5c76765cb156e5f5fd703159a4492d"
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end
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resource "Parse::RecDescent" do
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url "https://www.cpan.org/CPAN/authors/id/J/JT/JTBRAUN/Parse-RecDescent-1.967003.tar.gz"
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sha256 "d4dac8dad012a7eef271a0ac8ec399f9e3b0b53902644df9c208daef8b4b7f0a"
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end
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resource "Math::Symbolic" do
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url "https://www.cpan.org/CPAN/authors/id/S/SM/SMUELLER/Math-Symbolic-0.612.tar.gz"
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sha256 "a9af979956c4c28683c535b5e5da3cde198c0cac2a11b3c9a129da218b3b9c08"
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end
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resource "YAML::Tiny" do
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url "https://www.cpan.org/CPAN/authors/id/E/ET/ETHER/YAML-Tiny-1.70.tar.gz"
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sha256 "bbce4b52b5eafdb04e3043975a08dbf394d00b7d2c958adb9d03d9f7e9291255"
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end
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resource "File::Remove" do
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url "https://www.cpan.org/CPAN/authors/id/S/SH/SHLOMIF/File-Remove-1.57.tar.gz"
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sha256 "b3becd60165c38786d18285f770b8b06ebffe91797d8c00cc4730614382501ad"
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end
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resource "inc::Module::Install::DSL" do
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url "https://www.cpan.org/CPAN/authors/id/E/ET/ETHER/Module-Install-1.18.tar.gz"
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sha256 "29068ac33502cec959844c206516c09cc4a847cb57327d41015f605153ca645e"
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end
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resource "Class::Inspector" do
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url "https://www.cpan.org/CPAN/authors/id/A/AD/ADAMK/Class-Inspector-1.28.tar.gz"
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sha256 "3ca4b7a3ed1f4cc846c9a3c08f9a6e9ec07a9cbfd92510dea9513db61a923112"
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end
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resource "File::ShareDir" do
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url "https://www.cpan.org/CPAN/authors/id/R/RE/REHSACK/File-ShareDir-1.102.tar.gz"
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sha256 "7c7334b974882587fbd9bc135f6bc04ad197abe99e6f4761953fe9ca88c57411"
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end
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resource "Template" do
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url "https://www.cpan.org/CPAN/authors/id/A/AB/ABW/Template-Toolkit-2.26.tar.gz"
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sha256 "e7e1cf36026f1ef96d8233e18a3fb39e1eafe9109edc639ecf25b20651cd76be"
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end
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resource "Graph" do
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url "https://www.cpan.org/CPAN/authors/id/J/JH/JHI/Graph-0.9704.tar.gz"
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sha256 "325e8eb07be2d09a909e450c13d3a42dcb2a2e96cc3ac780fe4572a0d80b2a25"
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end
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resource "thrust" do
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url "https://github.com/thrust/thrust/releases/download/1.8.2/thrust-1.8.2.zip"
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sha256 "00925daee4d9505b7f33d0ed42ab0de0f9c68c4ffbe2a41e6d04452cdee77b2d"
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end
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def install
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ENV.prepend_create_path "PERL5LIB", libexec/"lib/perl5"
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resources.each do |r|
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r.stage do
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next if r.name == "thrust"
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# need to set TT_ACCEPT=y for Template library for non-interactive install
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perl_flags = "TT_ACCEPT=y" if r.name == "Template"
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system "perl", "Makefile.PL", "INSTALL_BASE=#{libexec}", perl_flags
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system "make"
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system "make", "install"
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end
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end
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(include/"thrust").install resource("thrust")
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system "perl", "Makefile.PL", "INSTALL_BASE=#{libexec}", "INSTALLSITESCRIPT=#{bin}"
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# Disable dynamic selection of perl which may cause segfault when an
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# incompatible perl is picked up.
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# See, e.g., https://github.com/Homebrew/homebrew-core/issues/4936
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inreplace "script/libbi", "#!/usr/bin/env perl", "#!/usr/bin/perl"
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system "make"
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system "make", "install"
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pkgshare.install "Test.bi", "test.conf"
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bin.env_script_all_files(libexec+"bin", :PERL5LIB => ENV["PERL5LIB"])
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end
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test do
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cp Dir[pkgshare/"Test.bi", pkgshare/"test.conf"], testpath
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system "#{bin}/libbi", "sample", "@test.conf"
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assert_predicate testpath/"test.nc", :exist?
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end
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end
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