hmmer 3.2.1

Closes #32804.

Signed-off-by: Shaun Jackman <sjackman@gmail.com>
This commit is contained in:
Torsten Seemann 2018-10-08 17:26:23 +11:00 committed by Shaun Jackman
parent 85ea337cf8
commit eb334f46dd

View file

@ -1,9 +1,8 @@
class Hmmer < Formula
desc "Build profile HMMs and scan against sequence databases"
homepage "http://hmmer.org/"
url "http://eddylab.org/software/hmmer3/3.1b2/hmmer-3.1b2.tar.gz"
sha256 "dd16edf4385c1df072c9e2f58c16ee1872d855a018a2ee6894205277017b5536"
revision 2
url "http://eddylab.org/software/hmmer/hmmer-3.2.1.tar.gz"
sha256 "a56129f9d786ec25265774519fc4e736bbc16e4076946dcbd7f2c16efc8e2b9c"
bottle do
cellar :any_skip_relocation
@ -15,16 +14,12 @@ class Hmmer < Formula
def install
system "./configure", "--prefix=#{prefix}"
# Fix error: install: hmmalign: No such file or directory
system "make"
system "make" # Fix error: install: hmmalign: No such file or directory
system "make", "install"
doc.install "Userguide.pdf", "tutorial"
end
test do
output = shell_output("#{bin}/hmmstat #{doc}/tutorial/minifam")
assert_match "PF00069.17", output
assert_match "PF00069.17", shell_output("#{bin}/hmmstat #{doc}/tutorial/Pkinase.hmm")
end
end