hmmer 3.2.1
Closes #32804. Signed-off-by: Shaun Jackman <sjackman@gmail.com>
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1 changed files with 4 additions and 9 deletions
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@ -1,9 +1,8 @@
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class Hmmer < Formula
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desc "Build profile HMMs and scan against sequence databases"
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homepage "http://hmmer.org/"
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url "http://eddylab.org/software/hmmer3/3.1b2/hmmer-3.1b2.tar.gz"
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sha256 "dd16edf4385c1df072c9e2f58c16ee1872d855a018a2ee6894205277017b5536"
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revision 2
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url "http://eddylab.org/software/hmmer/hmmer-3.2.1.tar.gz"
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sha256 "a56129f9d786ec25265774519fc4e736bbc16e4076946dcbd7f2c16efc8e2b9c"
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bottle do
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cellar :any_skip_relocation
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@ -15,16 +14,12 @@ class Hmmer < Formula
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def install
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system "./configure", "--prefix=#{prefix}"
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# Fix error: install: hmmalign: No such file or directory
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system "make"
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system "make" # Fix error: install: hmmalign: No such file or directory
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system "make", "install"
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doc.install "Userguide.pdf", "tutorial"
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end
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test do
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output = shell_output("#{bin}/hmmstat #{doc}/tutorial/minifam")
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assert_match "PF00069.17", output
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assert_match "PF00069.17", shell_output("#{bin}/hmmstat #{doc}/tutorial/Pkinase.hmm")
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end
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end
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