class Libbi < Formula desc "Bayesian state-space modelling on parallel computer hardware" homepage "https://libbi.org/" url "https://github.com/lawmurray/LibBi/archive/1.4.5.tar.gz" sha256 "af2b6d30e1502f99a3950d63ceaf7d7275a236f4d81eff337121c24fbb802fbe" head "https://github.com/lawmurray/LibBi.git" bottle do cellar :any_skip_relocation sha256 "9e3385af760fa9d77122311be8cc0da4993e5dbf514fd7449ddc45fef328e31f" => :mojave sha256 "f4777d1ce91c8e1b4a7b56db70ed1a15a605e3817ae063cdd7187ab40167bfed" => :high_sierra sha256 "d1916249f2268c6015852f177d0198b3a96dad65c406e867ab73fbb837e8fa39" => :sierra end depends_on "automake" depends_on "boost" depends_on "gsl" depends_on "netcdf" depends_on "qrupdate" resource "Test::Simple" do url "https://cpan.metacpan.org/authors/id/E/EX/EXODIST/Test-Simple-1.302133.tar.gz" sha256 "02bc2b4ec299886efcc29148308c9afb64e0f2c2acdeaa2dee33c3adfe6f96e2" end resource "Getopt::ArgvFile" do url "https://cpan.metacpan.org/authors/id/J/JS/JSTENZEL/Getopt-ArgvFile-1.11.tar.gz" sha256 "3709aa513ce6fd71d1a55a02e34d2f090017d5350a9bd447005653c9b0835b22" end resource "Carp::Assert" do url "https://cpan.metacpan.org/authors/id/N/NE/NEILB/Carp-Assert-0.21.tar.gz" sha256 "924f8e2b4e3cb3d8b26246b5f9c07cdaa4b8800cef345fa0811d72930d73a54e" end resource "File::Slurp" do url "https://cpan.metacpan.org/authors/id/U/UR/URI/File-Slurp-9999.19.tar.gz" sha256 "ce29ebe995097ebd6e9bc03284714cdfa0c46dc94f6b14a56980747ea3253643" end resource "Parse::Yapp" do url "https://cpan.metacpan.org/authors/id/W/WB/WBRASWELL/Parse-Yapp-1.21.tar.gz" sha256 "3810e998308fba2e0f4f26043035032b027ce51ce5c8a52a8b8e340ca65f13e5" end resource "Parse::Template" do url "https://cpan.metacpan.org/authors/id/P/PS/PSCUST/ParseTemplate-3.08.tar.gz" sha256 "3c7734f53999de8351a77cb09631d7a4a0482b6f54bca63d69d5a4eec8686d51" end resource "Parse::Lex" do url "https://cpan.metacpan.org/authors/id/P/PS/PSCUST/ParseLex-2.21.tar.gz" sha256 "f55f0a7d1e2a6b806a47840c81c16d505c5c76765cb156e5f5fd703159a4492d" end resource "Parse::RecDescent" do url "https://cpan.metacpan.org/authors/id/J/JT/JTBRAUN/Parse-RecDescent-1.967015.tar.gz" sha256 "1943336a4cb54f1788a733f0827c0c55db4310d5eae15e542639c9dd85656e37" end resource "Math::Symbolic" do url "https://cpan.metacpan.org/authors/id/S/SM/SMUELLER/Math-Symbolic-0.612.tar.gz" sha256 "a9af979956c4c28683c535b5e5da3cde198c0cac2a11b3c9a129da218b3b9c08" end resource "YAML::Tiny" do url "https://cpan.metacpan.org/authors/id/E/ET/ETHER/YAML-Tiny-1.73.tar.gz" sha256 "bc315fa12e8f1e3ee5e2f430d90b708a5dc7e47c867dba8dce3a6b8fbe257744" end resource "File::Remove" do url "https://cpan.metacpan.org/authors/id/S/SH/SHLOMIF/File-Remove-1.57.tar.gz" sha256 "b3becd60165c38786d18285f770b8b06ebffe91797d8c00cc4730614382501ad" end resource "inc::Module::Install::DSL" do url "https://cpan.metacpan.org/authors/id/E/ET/ETHER/Module-Install-1.19.tar.gz" sha256 "1a53a78ddf3ab9e3c03fc5e354b436319a944cba4281baf0b904fa932a13011b" end resource "Class::Inspector" do url "https://cpan.metacpan.org/authors/id/P/PL/PLICEASE/Class-Inspector-1.32.tar.gz" sha256 "cefadc8b5338e43e570bc43f583e7c98d535c17b196bcf9084bb41d561cc0535" end resource "File::ShareDir" do url "https://cpan.metacpan.org/authors/id/R/RE/REHSACK/File-ShareDir-1.104.tar.gz" sha256 "07b628efcdf902d6a32e6a8e084497e8593d125c03ad12ef5cc03c87c7841caf" end resource "Template" do url "https://cpan.metacpan.org/authors/id/A/AB/ABW/Template-Toolkit-2.27.tar.gz" sha256 "1311a403264d0134c585af0309ff2a9d5074b8ece23ece5660d31ec96bf2c6dc" end resource "Graph" do url "https://cpan.metacpan.org/authors/id/J/JH/JHI/Graph-0.9704.tar.gz" sha256 "325e8eb07be2d09a909e450c13d3a42dcb2a2e96cc3ac780fe4572a0d80b2a25" end resource "thrust" do url "https://github.com/thrust/thrust/archive/1.8.2.tar.gz" sha256 "83bc9e7b769daa04324c986eeaf48fcb53c2dda26bcc77cb3c07f4b1c359feb8" end def install ENV.prepend_create_path "PERL5LIB", libexec/"lib/perl5" resources.each do |r| r.stage do next if r.name == "thrust" # need to set TT_ACCEPT=y for Template library for non-interactive install perl_flags = "TT_ACCEPT=y" if r.name == "Template" system "perl", "Makefile.PL", "INSTALL_BASE=#{libexec}", perl_flags system "make" system "make", "install" end end resource("thrust").stage { (include/"thrust").install Dir["thrust/*"] } system "perl", "Makefile.PL", "INSTALL_BASE=#{libexec}", "INSTALLSITESCRIPT=#{bin}" # Disable dynamic selection of perl which may cause segfault when an # incompatible perl is picked up. # See, e.g., https://github.com/Homebrew/homebrew-core/issues/4936 inreplace "script/libbi", "#!/usr/bin/env perl", "#!/usr/bin/perl" system "make" system "make", "install" pkgshare.install "Test.bi", "test.conf" bin.env_script_all_files(libexec+"bin", :PERL5LIB => ENV["PERL5LIB"]) end test do cp Dir[pkgshare/"Test.bi", pkgshare/"test.conf"], testpath system "#{bin}/libbi", "sample", "@test.conf" assert_predicate testpath/"test.nc", :exist? end end