31 lines
769 B
Ruby
31 lines
769 B
Ruby
require 'formula'
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class GmapGsnap < Formula
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homepage 'http://research-pub.gene.com/gmap'
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url 'http://research-pub.gene.com/gmap/src/gmap-gsnap-2012-07-20.tar.gz'
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sha1 '9edb7750b923842f9c877f59934cdfd9f5cdf2b7'
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version "2012-07-20"
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depends_on "samtools"
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def install
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ENV['CC'] = "#{ENV.cc} -O3 -m#{MacOS.prefer_64_bit? ? 64 : 32}"
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system "./configure", "--prefix=#{prefix}"
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system "make"
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system "make install"
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end
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def caveats; <<-EOF.undent
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You will need to either download or build indexed search databases.
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See the readme file for how to do this:
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http://research-pub.gene.com/gmap/src/README
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Databases will be installed to:
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#{share}
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EOF
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end
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def test
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system "#{bin}/gsnap", "--version"
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end
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end
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