47 lines
1.6 KiB
Ruby
47 lines
1.6 KiB
Ruby
class Beagle < Formula
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desc "Evaluate the likelihood of sequence evolution on trees"
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homepage "https://github.com/beagle-dev/beagle-lib"
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url "https://github.com/beagle-dev/beagle-lib/archive/v3.1.1.tar.gz"
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sha256 "3ddb7f39863389816f6289f5da2fe921d0d4efe85dcf349fae3a2718cc14f0fb"
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bottle do
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cellar :any
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sha256 "01cebcb9d380b19863a55799d1d6639da3de35d7268a4f51dd60aefc26980c26" => :mojave
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sha256 "0c4a1f1d36005c0f137a368d407c8b8d2c9d06c14753ab2f139c1891fc6bd08b" => :high_sierra
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sha256 "40623dd49ad45063e21f3928f3efcfb16ad17c523e2cf272d489faf2e20b4062" => :sierra
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end
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depends_on "autoconf" => :build
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depends_on "automake" => :build
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depends_on "doxygen" => :build
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depends_on :java => [:build, :test]
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depends_on "libtool" => :build
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def install
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system "./autogen.sh"
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system "./configure", "--disable-dependency-tracking",
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"--disable-silent-rules",
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"--prefix=#{prefix}",
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"--without-cuda",
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"--disable-libtool-dev"
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system "make", "install"
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end
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test do
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(testpath/"test.cpp").write <<~EOS
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#include "libhmsbeagle/platform.h"
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int main() { return 0; }
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EOS
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(testpath/"T.java").write <<~EOS
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class T {
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static { System.loadLibrary("hmsbeagle-jni"); }
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public static void main(String[] args) {}
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}
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EOS
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system ENV.cxx, "-I#{include}/libhmsbeagle-1",
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testpath/"test.cpp", "-o", "test"
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system "./test"
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system "javac", "T.java"
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system "java", "-Djava.library.path=#{lib}", "T"
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end
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end
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