31 lines
991 B
Ruby
31 lines
991 B
Ruby
class Bedops < Formula
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desc "Set and statistical operations on genomic data of arbitrary scale"
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homepage "https://github.com/bedops/bedops"
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url "https://github.com/bedops/bedops/archive/v2.4.30.tar.gz"
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sha256 "218e0e367aa79747b2f90341d640776eea17befc0fdc35b0cec3c6184098d462"
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bottle do
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cellar :any_skip_relocation
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sha256 "f0ca3de056c5490202aabcf39467c27dc3cba80e8fd561346aec232659d020c0" => :high_sierra
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sha256 "2cda86557abfe9449ef177523789a5bac561a4535579dce12f610b742905ac00" => :sierra
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sha256 "913f411dbc2f1d1cb7a31bcdd804ca97ed24337b158943ad3e53ea7f61961af5" => :el_capitan
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end
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needs :cxx11
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def install
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system "make"
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system "make", "install", "BINDIR=#{bin}"
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end
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test do
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(testpath/"first.bed").write <<~EOS
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chr1\t100\t200
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EOS
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(testpath/"second.bed").write <<~EOS
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chr1\t300\t400
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EOS
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output = shell_output("#{bin}/bedops --complement first.bed second.bed")
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assert_match "chr1\t200\t300", output
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end
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end
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