29 lines
951 B
Ruby
29 lines
951 B
Ruby
class Hmmer < Formula
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desc "Build profile HMMs and scan against sequence databases"
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homepage "http://hmmer.org/"
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url "http://eddylab.org/software/hmmer3/3.1b2/hmmer-3.1b2.tar.gz"
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sha256 "dd16edf4385c1df072c9e2f58c16ee1872d855a018a2ee6894205277017b5536"
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revision 2
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bottle do
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cellar :any_skip_relocation
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sha256 "763753541930d4092f6e50fbde1669d9862d0ba4b096d6c6b144eb325019ca44" => :high_sierra
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sha256 "01707b89414c42564e60609e8a70f464a48bffa84278169cd3f467a885dd17a2" => :sierra
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sha256 "0f0254bebd48ec9003e6f99e2277e04914073e5dee00e764f5b5fb2ed9a7f1c3" => :el_capitan
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end
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def install
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system "./configure", "--prefix=#{prefix}"
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# Fix error: install: hmmalign: No such file or directory
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system "make"
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system "make", "install"
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doc.install "Userguide.pdf", "tutorial"
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end
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test do
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output = shell_output("#{bin}/hmmstat #{doc}/tutorial/minifam")
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assert_match "PF00069.17", output
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end
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end
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