27 lines
894 B
Ruby
27 lines
894 B
Ruby
class Seqtk < Formula
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desc "Toolkit for processing sequences in FASTA/Q formats"
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homepage "https://github.com/lh3/seqtk"
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url "https://github.com/lh3/seqtk/archive/v1.2.tar.gz"
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sha256 "bd53316645ab10f0aaba59e1e72c28442ee4c9c37fddaacce5e24757eff78d7b"
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bottle do
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cellar :any_skip_relocation
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sha256 "a2fcc7104562aeba2bcbbfd43ca2af2d6adc9825d6823776fad2c2332248a66e" => :high_sierra
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sha256 "e2c95a305e1a1f0624e909739e6c27ac4e4665790101c5d3d7ca1086f37b59c6" => :sierra
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sha256 "8a8ca9859f928227a15443d4203507bbe0fec28ac1c21938d1298c8180d66b35" => :el_capitan
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end
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def install
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system "make"
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bin.install "seqtk"
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end
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test do
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(testpath/"test.fasta").write <<~EOS
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>U00096.2:1-70
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AGCTTTTCATTCTGACTGCAACGGGCAATATGTCT
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CTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGC
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EOS
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assert_match "TCTCTG", shell_output("#{bin}/seqtk seq test.fasta")
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end
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end
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