119 lines
3.8 KiB
Ruby
119 lines
3.8 KiB
Ruby
class R < Formula
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desc "Software environment for statistical computing"
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homepage "https://www.r-project.org/"
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url "https://cran.r-project.org/src/base/R-3/R-3.5.0.tar.gz"
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sha256 "fd1725535e21797d3d9fea8963d99be0ba4c3aecadcf081b43e261458b416870"
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revision 1
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bottle do
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sha256 "e65df345554df730d9a3d90554a4afe345f2023712cddfea2e146496a04c7236" => :high_sierra
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sha256 "cc9a616bd0981ead6f885015e1e41ae7c057e7c15c1e3d86d4fee7fc736130f2" => :sierra
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sha256 "c5e9ef1321dfc402102fac4e0343ba1b12131a9c1c21d03e5d316a720d343dba" => :el_capitan
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end
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depends_on "pkg-config" => :build
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depends_on "gcc" # for gfortran
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depends_on "gettext"
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depends_on "jpeg"
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depends_on "libpng"
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depends_on "pcre"
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depends_on "readline"
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depends_on "xz"
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depends_on "openblas" => :optional
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depends_on :java => :optional
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# needed to preserve executable permissions on files without shebangs
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skip_clean "lib/R/bin"
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resource "gss" do
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url "https://cloud.r-project.org/src/contrib/gss_2.1-8.tar.gz", :using => :nounzip
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mirror "https://mirror.las.iastate.edu/CRAN/src/contrib/gss_2.1-8.tar.gz"
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sha256 "176cce8ddd939afb9ec3de6c731d13fbff38bc8f0291cf9c7aa4bf35491084bc"
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end
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def install
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# Fix dyld: lazy symbol binding failed: Symbol not found: _clock_gettime
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if MacOS.version == "10.11" && MacOS::Xcode.installed? &&
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MacOS::Xcode.version >= "8.0"
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ENV["ac_cv_have_decl_clock_gettime"] = "no"
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end
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args = [
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"--prefix=#{prefix}",
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"--enable-memory-profiling",
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"--without-cairo",
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"--without-x",
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"--with-aqua",
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"--with-lapack",
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"--enable-R-shlib",
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"SED=/usr/bin/sed", # don't remember Homebrew's sed shim
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]
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if build.with? "openblas"
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args << "--with-blas=-L#{Formula["openblas"].opt_lib} -lopenblas"
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ENV.append "LDFLAGS", "-L#{Formula["openblas"].opt_lib}"
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else
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args << "--with-blas=-framework Accelerate"
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ENV.append_to_cflags "-D__ACCELERATE__" if ENV.compiler != :clang
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end
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if build.with? "java"
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args << "--enable-java"
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else
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args << "--disable-java"
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end
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# Help CRAN packages find gettext and readline
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["gettext", "readline"].each do |f|
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ENV.append "CPPFLAGS", "-I#{Formula[f].opt_include}"
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ENV.append "LDFLAGS", "-L#{Formula[f].opt_lib}"
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end
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system "./configure", *args
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system "make"
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ENV.deparallelize do
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system "make", "install"
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end
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cd "src/nmath/standalone" do
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system "make"
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ENV.deparallelize do
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system "make", "install"
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end
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end
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r_home = lib/"R"
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# make Homebrew packages discoverable for R CMD INSTALL
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inreplace r_home/"etc/Makeconf" do |s|
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s.gsub!(/^CPPFLAGS =.*/, "\\0 -I#{HOMEBREW_PREFIX}/include")
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s.gsub!(/^LDFLAGS =.*/, "\\0 -L#{HOMEBREW_PREFIX}/lib")
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s.gsub!(/.LDFLAGS =.*/, "\\0 $(LDFLAGS)")
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end
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include.install_symlink Dir[r_home/"include/*"]
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lib.install_symlink Dir[r_home/"lib/*"]
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# avoid triggering mandatory rebuilds of r when gcc is upgraded
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inreplace lib/"R/etc/Makeconf", Formula["gcc"].prefix.realpath,
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Formula["gcc"].opt_prefix
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end
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def post_install
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short_version =
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`#{bin}/Rscript -e 'cat(as.character(getRversion()[1,1:2]))'`.strip
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site_library = HOMEBREW_PREFIX/"lib/R/#{short_version}/site-library"
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site_library.mkpath
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ln_s site_library, lib/"R/site-library"
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end
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test do
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assert_equal "[1] 2", shell_output("#{bin}/Rscript -e 'print(1+1)'").chomp
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assert_equal ".dylib", shell_output("#{bin}/R CMD config DYLIB_EXT").chomp
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testpath.install resource("gss")
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system bin/"R", "CMD", "INSTALL", "--library=.", Dir["gss*"].first
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assert_predicate testpath/"gss/libs/gss.so", :exist?,
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"Failed to install gss package"
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end
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end
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