26 lines
1 KiB
Ruby
26 lines
1 KiB
Ruby
class Mafft < Formula
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desc "Multiple alignments with fast Fourier transforms"
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homepage "https://mafft.cbrc.jp/alignment/software/"
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url "https://mafft.cbrc.jp/alignment/software/mafft-7.407-with-extensions-src.tgz"
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sha256 "1840b51a0b93f40b4d6076af996ee46396428d8dbaf7ba1d847abff9cb1463e5"
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bottle do
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cellar :any_skip_relocation
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sha256 "60555a1114a810872d411452cc09a5614b9a59a228781a9b502f18b56d0047de" => :mojave
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sha256 "b9d448733821c30381607630d773547758b378697760b448cd177d3d19e7e9e2" => :high_sierra
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sha256 "29fcbb6f12a136d0638c00726813706491f6822f6f6bf1f73bd178198cbd7558" => :sierra
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sha256 "8a3bcbc305bf8d1c5aebe9e98e972c1050cbf10cc39669e0b33098045eab3557" => :el_capitan
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end
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def install
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make_args = %W[CC=#{ENV.cc} CXX=#{ENV.cxx} PREFIX=#{prefix} install]
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system "make", "-C", "core", *make_args
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system "make", "-C", "extensions", *make_args
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end
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test do
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(testpath/"test.fa").write ">1\nA\n>2\nA"
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output = shell_output("#{bin}/mafft test.fa")
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assert_match ">1\na\n>2\na", output
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end
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end
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