25 lines
964 B
Ruby
25 lines
964 B
Ruby
class Mafft < Formula
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desc "Multiple alignments with fast Fourier transforms"
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homepage "https://mafft.cbrc.jp/alignment/software/"
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url "https://mafft.cbrc.jp/alignment/software/mafft-7.429-with-extensions-src.tgz"
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sha256 "a939b153a5ebaa18a786ad0598ce11d177f4ccff698404a9f9686a38fc6ee67b"
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bottle do
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cellar :any_skip_relocation
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sha256 "8286d20021c84330602546f9bc7d12f3440b62cf4e41c53188ec4409608a759e" => :mojave
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sha256 "b7a38f20fb6fc2d10845b6605962cedc1f2dd952fd46bb420a13203b2873e632" => :high_sierra
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sha256 "39fe0fcdb27d0a2e358c3c9ea41d6f07bd169f228943bc37a1b3186f67833513" => :sierra
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end
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def install
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make_args = %W[CC=#{ENV.cc} CXX=#{ENV.cxx} PREFIX=#{prefix} install]
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system "make", "-C", "core", *make_args
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system "make", "-C", "extensions", *make_args
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end
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test do
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(testpath/"test.fa").write ">1\nA\n>2\nA"
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output = shell_output("#{bin}/mafft test.fa")
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assert_match ">1\na\n>2\na", output
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end
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end
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