homebrew-core/Formula/cromwell.rb
2019-10-07 22:15:10 -04:00

64 lines
1.7 KiB
Ruby

class Cromwell < Formula
desc "Workflow Execution Engine using Workflow Description Language"
homepage "https://github.com/broadinstitute/cromwell"
url "https://github.com/broadinstitute/cromwell/releases/download/47//cromwell-47.jar"
sha256 "e0fbe17bb71741d5a231d0f3376f2a3cee2d8da084b615fdec95fea6d4159a42"
head do
url "https://github.com/broadinstitute/cromwell.git"
depends_on "sbt" => :build
end
bottle :unneeded
depends_on :java => "1.8+"
resource "womtool" do
url "https://github.com/broadinstitute/cromwell/releases/download/47//womtool-47.jar"
sha256 "a82aa384abdaa1941e1c10229482d3d6010fc68d30b1c9f8023bc26be9c6b84b"
end
def install
if build.head?
system "sbt", "assembly"
libexec.install Dir["server/target/scala-*/cromwell-*.jar"][0]
libexec.install Dir["womtool/target/scala-2.12/womtool-*.jar"][0]
else
libexec.install Dir["cromwell-*.jar"][0]
resource("womtool").stage do
libexec.install Dir["womtool-*.jar"][0]
end
end
bin.write_jar_script Dir[libexec/"cromwell-*.jar"][0], "cromwell", "$JAVA_OPTS"
bin.write_jar_script Dir[libexec/"womtool-*.jar"][0], "womtool"
end
test do
(testpath/"hello.wdl").write <<~EOS
task hello {
String name
command {
echo 'hello ${name}!'
}
output {
File response = stdout()
}
}
workflow test {
call hello
}
EOS
(testpath/"hello.json").write <<~EOS
{
"test.hello.name": "world"
}
EOS
result = shell_output("#{bin}/cromwell run --inputs hello.json hello.wdl")
assert_match "test.hello.response", result
end
end