47 lines
1.3 KiB
Ruby
47 lines
1.3 KiB
Ruby
require 'formula'
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class Tmap < Formula
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homepage 'https://github.com/iontorrent/TMAP'
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url 'https://github.com/iontorrent/TMAP.git', :tag => 'tmap.3.2.0'
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sha1 'da3eb4ce3428cec1f5ac12467af4802df6188711'
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version '3.2.0'
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head 'https://github.com/iontorrent/TMAP.git'
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env :std
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option '32-bit'
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option 'indels', 'Enable adjacent insertion and deletions in the alignment'
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option 'perf', 'Enable google performance tools for profiling and heap checking'
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option 'nocolor', 'Disable terminal coloring'
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depends_on :automake
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depends_on :libtool
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depends_on 'google-perftools' if build.include? 'perf'
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fails_with :clang do
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build 421
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cause 'Missing symbols being discussed in iontorrent/TMAP#3'
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end
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def install
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system 'sh', 'autogen.sh'
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args = %W[
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--disable-dependency-tracking
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--prefix=#{prefix}
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]
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args << '--enable-32bit-support' if build.include? '32-bit' or not MacOS.prefer_64_bit?
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args << '--enable-perftools' if build.include? 'perf'
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args << '--disable-coloring' if build.include? 'nocolor'
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args << '--enable-adjacent-indels' if build.include? 'indels'
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system "./configure", *args
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ENV.j1
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system 'make'
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system "make install"
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end
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def test
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system "#{bin}/tmap", "-v"
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end
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end
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