36 lines
1.3 KiB
Ruby
36 lines
1.3 KiB
Ruby
class Snakemake < Formula
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desc "Pythonic workflow system"
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homepage "https://bitbucket.org/snakemake/snakemake/wiki/Home"
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url "https://pypi.python.org/packages/source/s/snakemake/snakemake-3.5.5.tar.gz"
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sha256 "1f13667fd0dea7d2f35414399646288b8aece2cf9791566992001d95d123eb1b"
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bottle do
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cellar :any_skip_relocation
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sha256 "d2a20de3b12504083c1a5d648e0ea522d9ce42c9db01d341ecf5710a6b03fa9a" => :sierra
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sha256 "782c11c3d9aa78d79cc6241bac326baae5a56d53f0e3e878e03539b0c1032017" => :el_capitan
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sha256 "75d1e54fa745a3ae4bceacd30521e696789782b03465462b914ce8f06fc01018" => :yosemite
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sha256 "a5bb0c91f5632b86e0684545fe36600349ced8643e0d98034c62eaf97580ce55" => :mavericks
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end
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depends_on :python3
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def install
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xy = Language::Python.major_minor_version "python3"
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ENV.prepend_create_path "PYTHONPATH", libexec/"lib/python#{xy}/site-packages"
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system "python3", *Language::Python.setup_install_args(libexec)
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bin.install Dir[libexec/"bin/*"]
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bin.env_script_all_files(libexec/"bin", :PYTHONPATH => ENV["PYTHONPATH"])
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end
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test do
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(testpath/"Snakefile").write <<-EOS.undent
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rule testme:
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output:
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"test.out"
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shell:
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"touch {output}"
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EOS
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system "#{bin}/snakemake"
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end
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end
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