32 lines
1.1 KiB
Ruby
32 lines
1.1 KiB
Ruby
class Spades < Formula
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desc "De novo genome sequence assembly"
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homepage "http://cab.spbu.ru/software/spades/"
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url "http://cab.spbu.ru/files/release3.13.0/SPAdes-3.13.0.tar.gz"
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mirror "https://github.com/ablab/spades/releases/download/v3.13.0/SPAdes-3.13.0.tar.gz"
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sha256 "c63442248c4c712603979fa70503c2bff82354f005acda2abc42dd5598427040"
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revision 1
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bottle do
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cellar :any
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sha256 "f79562a627e66647a7013f989e257f3ed33023daf7cbc9f836fecb0356766aa7" => :catalina
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sha256 "6eff79211afd0a5f2a3194db28a630bfa53cec5b968dc810e65bbaefce55fae4" => :mojave
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sha256 "ef7d029efa28d81c236a428f40c0780b074827b50e5618cc328b4cfffdc7e579" => :high_sierra
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sha256 "8418d4226f398f2853500eb3fea5788d58b392202101934a4fba502f7c77efcd" => :sierra
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end
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depends_on "cmake" => :build
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depends_on "gcc"
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fails_with :clang # no OpenMP support
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def install
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mkdir "src/build" do
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system "cmake", "..", *std_cmake_args
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system "make", "install"
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end
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end
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test do
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assert_match "TEST PASSED CORRECTLY", shell_output("#{bin}/spades.py --test")
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end
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end
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