40 lines
1.3 KiB
Ruby
40 lines
1.3 KiB
Ruby
class Fastme < Formula
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desc "Accurate and fast distance-based phylogeny inference program"
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homepage "http://www.atgc-montpellier.fr/fastme/"
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url "https://gite.lirmm.fr/atgc/FastME/raw/v2.1.6.1/tarball/fastme-2.1.6.1.tar.gz"
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sha256 "ac05853bc246ccb3d88b8bc075709a82cfe096331b0f4682b639f37df2b30974"
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revision 1
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bottle do
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cellar :any
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sha256 "2d77addf56ac300c3b219b1716b81d1fe1a04ee1759a79cab4d59aeee676a4ec" => :catalina
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sha256 "65bfd93ee6bdc21881fe342dd289a4c0808a3eb0abb1e04e174c32fd43a0bc77" => :mojave
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sha256 "eac83026ed4ce4b30511c1f7b79ff032e9c3c607a52d63881951937e210d663c" => :high_sierra
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sha256 "1a04d48b4a33ad3c854a4d45724f339438455f47e20d870c265b070ec75db08b" => :sierra
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end
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depends_on "gcc"
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fails_with :clang # no OpenMP support
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def install
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system "./configure", "--disable-debug",
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"--disable-dependency-tracking",
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"--disable-silent-rules",
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"--prefix=#{prefix}"
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system "make", "install"
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end
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test do
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(testpath/"test.dist").write <<~EOS
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4
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A 0.0 1.0 2.0 4.0
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B 1.0 0.0 3.0 5.0
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C 2.0 3.0 0.0 6.0
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D 4.0 5.0 6.0 0.0
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EOS
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system "#{bin}/fastme", "-i", "test.dist"
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assert_predicate testpath/"test.dist_fastme_tree.nwk", :exist?
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end
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end
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