29 lines
973 B
Ruby
29 lines
973 B
Ruby
class Bedops < Formula
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desc "Set and statistical operations on genomic data of arbitrary scale"
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homepage "https://github.com/bedops/bedops"
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url "https://github.com/bedops/bedops/archive/v2.4.37.tar.gz"
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sha256 "740e8598a5d6254b49576868cd8b7cda424f2afe3acaf62d43d186b032e443e9"
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bottle do
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cellar :any_skip_relocation
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sha256 "cca7abf4f74c6d0a4ba34cd491a63364a0b1093b5ed7a290d3a8d8f554ce008d" => :catalina
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sha256 "cca7abf4f74c6d0a4ba34cd491a63364a0b1093b5ed7a290d3a8d8f554ce008d" => :mojave
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sha256 "004b816bfd02e79d59e8394dd566561f4638bbf2eb9ada57651bc290f070a163" => :high_sierra
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end
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def install
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system "make"
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system "make", "install", "BINDIR=#{bin}"
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end
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test do
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(testpath/"first.bed").write <<~EOS
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chr1\t100\t200
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EOS
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(testpath/"second.bed").write <<~EOS
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chr1\t300\t400
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EOS
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output = shell_output("#{bin}/bedops --complement first.bed second.bed")
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assert_match "chr1\t200\t300", output
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end
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end
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