31 lines
991 B
Ruby
31 lines
991 B
Ruby
class Bedops < Formula
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desc "Set and statistical operations on genomic data of arbitrary scale"
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homepage "https://github.com/bedops/bedops"
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url "https://github.com/bedops/bedops/archive/v2.4.33.tar.gz"
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sha256 "15ac2aec77702893dcd32c08d28083bd887d743d1c758ff9180ef9c53357a44f"
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bottle do
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cellar :any_skip_relocation
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sha256 "7e6bca355ca206b71d5ece7213722d907cd782c907def2c6a6e464c090fb0389" => :high_sierra
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sha256 "0331704de7ea757e4657a486e20f1467d4fdff657c5bec92bef80dd8eb9ddbc1" => :sierra
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sha256 "e11490f1c098290b52b5c7575ca16b5e46180afc94492a7b41b1236cd0129780" => :el_capitan
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end
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needs :cxx11
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def install
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system "make"
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system "make", "install", "BINDIR=#{bin}"
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end
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test do
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(testpath/"first.bed").write <<~EOS
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chr1\t100\t200
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EOS
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(testpath/"second.bed").write <<~EOS
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chr1\t300\t400
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EOS
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output = shell_output("#{bin}/bedops --complement first.bed second.bed")
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assert_match "chr1\t200\t300", output
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end
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end
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